CV
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Experience
Postdoctoral Researcher – Medical Imaging
IMAGE Section, DIKU · 2024 – Present
- Curate dental patient datasets for treatment‑outcome prediction and big‑data analysis.
- Building segmentation pipelines that embed organ‑specific biomechanical priors to reduce annotation time.
PhD Researcher – Biophysics
Niels Bohr Institute · 2021 – 2024
- Used differentiable programming to study microorganism chemotaxis and optimal behaviour.
- Built RL agents mirroring cellular navigation.
- Published in PRL, PNAS, etc.; three‑month visit to Imperial College London on biological systems theory.
Teaching Assistant
University of Copenhagen · 2020 – 2023
- High‑Performance Programming & Systems
- Elements of Machine Learning
- Numerical Methods in Physics
Software Developer
Nucleids Applied Science, Barcelona · Jun 2018 – Aug 2019
- Built WPFÂ C# tools for scientific computing in labs & nuclear plants.
- Added real‑time monitoring + analysis for particle‑detection rigs.
Education
PhD in Biophysics
Niels Bohr Institute, University of Copenhagen · 2021 – 2024
Dissertation: Mind the Gradient: Differentiable Computational Methods in Microorganism Behaviour Studies
MSc in Computational Physics
Niels Bohr Institute, University of Copenhagen · 2019 – 2021
Thesis: Use of Tensor Processing Units (TPUs) in Physics Simulations
BSc in Physics
University of Barcelona · 2014 – 2019
Minor: Theoretical Physics
Projects
Full code lives on GitHub.
A curated list with short descriptions is over here.
Publications
Peer‑reviewed work in Nature Communications Biology, PNAS, PRL, and more.
Complete list with abstracts + links here.
Contact
- Email: aalonso@pm.me
- GitHub: @alonfnt
- LinkedIn: Albert Alonso
- Google Scholar: Albert Alonso